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Protein Observer
Companion to The Limits of Falsifiability
Hydrophobic
Hydrophilic
Measured
Challenge: Track the Residue
System State
0
Measurements
0%
Fold Progress
Uncertainty100%
Click on residues to measure them. Each measurement collapses uncertainty—but the protein may have taken many paths to get here.
Path degeneracy: Even if the protein folds correctly, you can't know which of the many possible paths it took. The blur represents this irreducible uncertainty about energy flows.
The paradox: You can't measure energy flows without changing them. The act of observation doesn't just risk a different outcome—it means you can never know what would have happened without observation.